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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2303Ribosomal protein S6 modification protein (rimK); Similar to GB:L77117 SP:Q58407 PID:1591661 percent identity: 32.21; identified by sequence similarity; putative. (286 aa)    
Predicted Functional Partners:
AF_0405
Predicted coding region AF_0405; Hypothetical protein; identified by GeneMark; putative.
   
 
 0.956
AF_2302
Predicted coding region AF_2302; Hypothetical protein; identified by GeneMark; putative.
       0.847
AF_2307
Predicted coding region AF_2307; Hypothetical protein; identified by GeneMark; putative.
 
     0.718
AF_2304
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58701 PID:1591944 percent identity: 35.82; identified by sequence similarity; putative.
       0.645
AF_1766
Amino-acid ABC transporter, periplasmic binding protein/protein kinase; Similar to SP:P54952 PID:1408498 GB:AL009126 percent identity: 27.40; identified by sequence similarity; putative.
 
   
 0.598
AF_1536
Glutaredoxin (grx-1); Similar to PID:1652611 percent identity: 34.29; identified by sequence similarity; putative.
     
 0.528
argB
Acetylglutamate kinase (argB); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
     
 0.519
pycA
Biotin carboxylase (acc); Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.487
corA
Magnesium and cobalt transporter (corA); Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
     0.486
argC
N-acetyl-gamma-glutamyl-phosphate reductase (argC); Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
  
 0.481
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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