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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2309Conserved hypothetical transmembrane protein; Similar to GB:D26185 SP:P37514 GB:L16865 PID:438464 PID:467368 percent identity: 24.83; identified by sequence similarity; putative. (537 aa)    
Predicted Functional Partners:
AF_2308
Arsenite transport protein (arsB); Similar to SP:P08691 GB:J02591 SP:P37310 GB:X80057 PID:151858 percent identity: 24.66; identified by sequence similarity; putative.
     
 0.795
AF_2306
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58075 PID:1591374 percent identity: 33.33; identified by sequence similarity; putative.
  
  
 0.780
AF_2307
Predicted coding region AF_2307; Hypothetical protein; identified by GeneMark; putative.
  
    0.780
AF_2310
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57846 PID:1591108 percent identity: 47.01; identified by sequence similarity; putative; Belongs to the MEMO1 family.
  
    0.578
AF_1324
Carbohydrate kinase, FGGY family; Similar to SP:P27155 PID:48836 percent identity: 27.10; identified by sequence similarity; putative.
 
  
 0.425
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.