STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2325Predicted coding region AF_2325; Hypothetical protein; identified by GeneMark; putative. (94 aa)    
Predicted Functional Partners:
eif2b
Translation initiation factor eIF-2, subunit beta, putative; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-beta/eIF-5 family.
       0.872
AF_2324
Fmu and fmv protein; Similar to PID:1652035 percent identity: 28.57; identified by sequence similarity; putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
     0.806
AF_1805
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57885 PID:1591147 percent identity: 48.52; identified by sequence similarity; putative.
 
     0.663
AF_0735
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58387 PID:1591640 percent identity: 36.87; identified by sequence similarity; putative.
 
     0.658
nreA
Predicted coding region AF_1346; Involved in DNA damage repair.
  
     0.640
AF_2031
Predicted coding region AF_2031; Hypothetical protein; identified by GeneMark; putative.
 
     0.629
cdc6-1
Cell division control protein 6, putative; Involved in regulation of DNA replication.
  
     0.626
AF_1972
Conserved hypothetical protein; Similar to GB:L77117 PID:1500551 percent identity: 30.07; identified by sequence similarity; putative.
       0.624
AF_2157
Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.624
AF_1347
Predicted coding region AF_1347; Hypothetical protein; identified by GeneMark; putative.
  
     0.620
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.