Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_2368long-chain-fatty-acid--CoA ligase (fadD-9); Similar to SP:P29212 GB:L02649 GB:X70994 PID:581070 GB:U00096 percent identity: 38.75; identified by sequence similarity; putative. (562 aa)    
Predicted Functional Partners:
aroA-2
5-enolpyruvylshikimate 3-phosphate synthase (aroA); Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
      0.851
AF_0200
long-chain-fatty-acid--CoA ligase (fadD-2); Similar to GB:L42023 SP:P44446 PID:1004105 PID:1221904 PID:1204261 percent identity: 34.82; identified by sequence similarity; putative.
 
 
0.693
AF_2369
Predicted coding region AF_2369; Hypothetical protein; identified by GeneMark; putative.
     
 0.666
rpl6
LSU ribosomal protein L6P (rpl6P); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.644
AF_1029
long-chain-fatty-acid--CoA ligase (fadD-5); Similar to SP:P29212 GB:L02649 GB:X70994 PID:581070 GB:U00096 percent identity: 37.94; identified by sequence similarity; putative.
  
  
 
0.624
AF_1772
long-chain-fatty-acid--CoA ligase (fadD-7); Similar to SP:P29212 GB:L02649 GB:X70994 PID:581070 GB:U00096 percent identity: 38.67; identified by sequence similarity; putative.
  
  
 
0.607
AF_0840
long-chain-fatty-acid--CoA ligase (fadD-4); Similar to SP:P29212 GB:L02649 GB:X70994 PID:581070 GB:U00096 percent identity: 38.12; identified by sequence similarity; putative.
  
  
 
0.606
rpl3
LSU ribosomal protein L3P (rpl3P); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.590
AF_2370
Conserved hypothetical protein; Similar to GB:L77117 PID:1499721 percent identity: 29.41; identified by sequence similarity; putative; Belongs to the UPF0148 family.
       0.572
rpl15
LSU ribosomal protein L15P (rpl15P); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
   0.544
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.