Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_2387Conserved hypothetical protein; Similar to SP:P54158 PID:1256620 GB:AL009126 percent identity: 23.42; identified by sequence similarity; putative. (144 aa)    
Predicted Functional Partners:
AF_2388
Conserved hypothetical transmembrane protein; Similar to GB:L77117 SP:Q57891 PID:1591153 percent identity: 33.21; identified by sequence similarity; putative.
       0.683
AF_2385
Molybdopterin oxidoreductase, iron-sulfur binding subunit; Similar to SP:P31076 GB:X65042 PID:48527 percent identity: 46.93; identified by sequence similarity; putative.
       0.634
AF_2386
Molybdopterin oxidoreductase, membrane subunit; Similar to SP:P31077 GB:X65042 PID:48528 percent identity: 30.31; identified by sequence similarity; putative.
       0.634
AF_2384
Molybdopterin oxidoreductase, molybdopterin binding subunit; Similar to SP:P31075 GB:X65042 PID:48526 percent identity: 34.56; identified by sequence similarity; putative.
       0.621
AF_0539
Conserved hypothetical protein; Similar to PID:662338 percent identity: 34.10; identified by sequence similarity; putative.
    
 0.519
AF_1181
GTP-binding protein; Similar to GP:1732241 percent identity: 36.26; identified by sequence similarity; putative.
    
 0.519
AF_2209
Conserved hypothetical protein; Similar to SP:P46577 percent identity: 31.33; identified by sequence similarity; putative.
    
 0.519
AF_1153
Iron-sulfur cluster binding protein; Similar to PID:1652823 percent identity: 27.94; identified by sequence similarity; putative.
  
    0.509
rps13
SSU ribosomal protein S13P (rps13P); Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.
  
    0.496
AF_2383
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57890 PID:1591152 percent identity: 34.08; identified by sequence similarity; putative.
 
     0.459
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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