Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_2406ATP-dependent RNA helicase, putative; Similar to GB:L77117 PID:1592195 percent identity: 35.19; identified by sequence similarity; putative. (766 aa)    
Predicted Functional Partners:
AF_1245
Na+/H+ antiporter (napA-2); Similar to SP:P26235 PID:148316 percent identity: 28.41; identified by sequence similarity; putative.
   
    0.848
AF_2407
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58298 PID:1591566 percent identity: 35.33; identified by sequence similarity; putative.
  
    0.687
pol
DNA polymerase B1 (polB); Similar to PID:807830 percent identity: 45.13; identified by sequence similarity; putative.
    
 
 0.667
AF_0004
RNase L inhibitor; Similar to GB:L77117 SP:Q58129 PID:1591435 percent identity: 54.45; identified by sequence similarity; putative.
 
     0.660
AF_2276
Conserved hypothetical protein; Similar to GB:L77117 PID:1591555 percent identity: 39.31; identified by sequence similarity; putative.
  
    0.536
AF_0024
Alcohol dehydrogenase, iron-containing; Similar to GB:M26941 SP:P13604 PID:144714 percent identity: 36.18; identified by sequence similarity; putative.
   
    0.465
AF_0339
Alcohol dehydrogenase, iron-containing; Similar to GB:M26941 SP:P13604 PID:144714 percent identity: 37.40; identified by sequence similarity; putative.
   
    0.465
AF_2019
Alcohol dehydrogenase, iron-containing; Similar to SP:P45513 PID:493086 percent identity: 35.71; identified by sequence similarity; putative.
   
    0.465
AF_1057
Cytochrome C-type biogenesis protein (ccdA); Similar to SP:P45706 PID:870925 PID:1405449 GB:AL009126 percent identity: 30.69; identified by sequence similarity; putative.
   
    0.444
AF_2046
Cytochrome oxidase, subunit I, putative; Similar to GP:1773053 percent identity: 25.14; identified by sequence similarity; putative.
   
    0.444
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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