STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2425Methanol dehydrogenase regulatory protein (moxR); Similar to PID:1001216 PID:1001272 percent identity: 48.33; identified by sequence similarity; putative. (324 aa)    
Predicted Functional Partners:
AF_2424
Conserved hypothetical protein; Similar to PID:1652337 percent identity: 27.67; identified by sequence similarity; putative.
 
  
 0.976
AF_2400
Predicted coding region AF_2400; Hypothetical protein; identified by GeneMark; putative.
 
     0.795
AF_2423
Predicted coding region AF_2423; Hypothetical protein; identified by GeneMark; putative.
       0.775
AF_2422
Predicted coding region AF_2422; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_2251
Competence-damage protein, putative; Similar to percent identity: 28.02; identified by sequence similarity; putative; Belongs to the CinA family.
     
 0.651
AF_1646
Conserved hypothetical protein; Similar to GB:L77117 PID:1591632 percent identity: 34.23; identified by sequence similarity; putative.
   
    0.646
leuS
leucyl-tRNA synthetase (leuS); Similar to GB:L77117 SP:Q58050 PID:1591345 percent identity: 49.68; identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.642
AF_2007
Riboflavin-specific deaminase (ribG); Catalyzes an early step in riboflavin biosynthesis, the NADPH-dependent reduction of the ribose side chain of 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate, yielding 2,5-diamino-6- ribitylamino-4(3H)-pyrimidinone 5'-phosphate.
       0.618
AF_2401
Predicted coding region AF_2401; Hypothetical protein; identified by GeneMark; putative.
       0.618
htpX
Heat shock protein (htpX); Similar to GB:L77117 PID:1592249 percent identity: 32.95; identified by sequence similarity; putative; Belongs to the peptidase M48B family.
  
    0.616
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.