STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_2428Conserved hypothetical protein; Similar to GB:L77117 PID:1591816 percent identity: 33.21; identified by sequence similarity; putative. (262 aa)    
Predicted Functional Partners:
rio2
Conserved hypothetical protein; Similar to GB:L77117 PID:1499920 percent identity: 33.59; identified by sequence similarity; putative.
 
     0.799
AF_2427
Predicted coding region AF_2427; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_2429
enoyl-CoA hydratase (fad-5); Similar to GB:U00010 PID:466794 SP:P53526 percent identity: 34.67; identified by sequence similarity; putative.
     
 0.678
AF_2257
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58186 PID:1499596 percent identity: 30.64; identified by sequence similarity; putative.
       0.618
alaS
alanyl-tRNA synthetase (alaS); Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Incorrectly charged aminoacyl-tRNA(Ala) is also edited in situ by the editing domain.
       0.601
cofE
Conserved hypothetical protein; Catalyzes the GTP-dependent successive addition of two L- glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy- 5-deazariboflavin (F420-0) to form coenzyme F420-0-glutamyl-glutamate (F420-2), with a gamma-linkage between the two glutamates. May be able to add up to four gamma-linked glutamates, since F420-4 is a species that was isolated from A.fulgidus.
       0.601
AF_2424
Conserved hypothetical protein; Similar to PID:1652337 percent identity: 27.67; identified by sequence similarity; putative.
  
    0.570
AF_2422
Predicted coding region AF_2422; Hypothetical protein; identified by GeneMark; putative.
       0.550
AF_2423
Predicted coding region AF_2423; Hypothetical protein; identified by GeneMark; putative.
       0.550
AF_2425
Methanol dehydrogenase regulatory protein (moxR); Similar to PID:1001216 PID:1001272 percent identity: 48.33; identified by sequence similarity; putative.
       0.550
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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