Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BB_0002Identified by match to protein family HMM PF00933. (342 aa)    
Predicted Functional Partners:
BB_0620
Beta-glucosidase, putative; Identified by match to protein family HMM PF00933.
  
  
0.944
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
     
 0.838
BB_0262
M23 peptidase domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.
  
  
 0.830
p83/100
Borrelia P83/P100 antigen; Identified by match to protein family HMM PF05262.
  
  
 0.647
BB_0068
Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484.
     
 0.595
BB_0421
Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484.
     
 0.595
BB_0625
N-acetylmuramoyl-L-alanine amidase, putative; Identified by match to protein family HMM PF01476; match to protein family HMM PF01520.
     
 0.578
BB_0600
IPT/TIG domain protein; Identified by match to protein family HMM PF01833.
      
 0.565
BB_0259
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
     
 0.536
BB_0806
Lipoprotein, putative.
     
 0.523
Your Current Organism:
Borreliella burgdorferi
NCBI taxonomy Id: 224326
Other names: B. burgdorferi B31, Borrelia burgdorferi B31, Borrelia burgdorferi str. B31, Borreliella burgdorferi B31
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