Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BB_0068Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. (293 aa)    
Predicted Functional Partners:
BB_0600
IPT/TIG domain protein; Identified by match to protein family HMM PF01833.
      
 0.906
BB_0259
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464.
     
 0.893
BB_0069
Aminopeptidase II; Identified by match to protein family HMM PF02073.
       0.850
BB_0070
Conserved hypothetical protein; Identified by match to protein family HMM PF02681.
       0.826
BB_0262
M23 peptidase domain protein; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.
      
 0.822
BB_0168
DnaK suppressor, putative; Identified by match to protein family HMM PF01258.
      
 0.815
BB_0002
Identified by match to protein family HMM PF00933.
     
 0.595
BB_0323
LysM domain protein; Identified by match to protein family HMM PF01476.
      
 0.570
BB_0421
Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484.
  
   
0.533
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity).
       0.532
Your Current Organism:
Borreliella burgdorferi
NCBI taxonomy Id: 224326
Other names: B. burgdorferi B31, Borrelia burgdorferi B31, Borrelia burgdorferi str. B31, Borreliella burgdorferi B31
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