Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BB_0117 | BB_0167 | BB_0117 | BB_0167 | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | Outer membrane protein; Identified by match to protein family HMM PF00691. | 0.892 |
| BB_0117 | BB_0213 | BB_0117 | BB_0213 | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | Lipoprotein, putative. | 0.823 |
| BB_0117 | BB_0718 | BB_0117 | BB_0718 | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. | 0.897 |
| BB_0117 | BB_0823 | BB_0117 | BB_0823 | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | Lipoprotein, putative. | 0.897 |
| BB_0117 | alr | BB_0117 | BB_0160 | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.904 |
| BB_0117 | murF | BB_0117 | BB_0304 | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.832 |
| BB_0167 | BB_0117 | BB_0167 | BB_0117 | Outer membrane protein; Identified by match to protein family HMM PF00691. | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | 0.892 |
| BB_0167 | BB_0213 | BB_0167 | BB_0213 | Outer membrane protein; Identified by match to protein family HMM PF00691. | Lipoprotein, putative. | 0.659 |
| BB_0167 | BB_0718 | BB_0167 | BB_0718 | Outer membrane protein; Identified by match to protein family HMM PF00691. | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. | 0.883 |
| BB_0167 | BB_0823 | BB_0167 | BB_0823 | Outer membrane protein; Identified by match to protein family HMM PF00691. | Lipoprotein, putative. | 0.892 |
| BB_0167 | alr | BB_0167 | BB_0160 | Outer membrane protein; Identified by match to protein family HMM PF00691. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.895 |
| BB_0167 | murF | BB_0167 | BB_0304 | Outer membrane protein; Identified by match to protein family HMM PF00691. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.847 |
| BB_0213 | BB_0117 | BB_0213 | BB_0117 | Lipoprotein, putative. | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | 0.823 |
| BB_0213 | BB_0167 | BB_0213 | BB_0167 | Lipoprotein, putative. | Outer membrane protein; Identified by match to protein family HMM PF00691. | 0.659 |
| BB_0213 | BB_0718 | BB_0213 | BB_0718 | Lipoprotein, putative. | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. | 0.820 |
| BB_0213 | BB_0823 | BB_0213 | BB_0823 | Lipoprotein, putative. | Lipoprotein, putative. | 0.823 |
| BB_0213 | alr | BB_0213 | BB_0160 | Lipoprotein, putative. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.820 |
| BB_0213 | murF | BB_0213 | BB_0304 | Lipoprotein, putative. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.508 |
| BB_0718 | BB_0117 | BB_0718 | BB_0117 | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. | Identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065. | 0.897 |
| BB_0718 | BB_0167 | BB_0718 | BB_0167 | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. | Outer membrane protein; Identified by match to protein family HMM PF00691. | 0.883 |
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