Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BB_0171Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (195 aa)    
Predicted Functional Partners:
BB_0170
Conserved hypothetical protein.
 
 
 0.994
BB_0175
Conserved hypothetical protein.
 
  
 0.968
BB_0174
Conserved hypothetical protein.
     
 0.956
BB_0172
Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.
 
   
 0.945
BB_0176
ATPase family associated with various cellular activities (AAA), putative; Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
     
 0.886
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.823
BB_0058
Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
 
 
 0.801
BB_0400
Conserved hypothetical protein.
 
 
 0.785
BB_0399
Putative ankyrin repeat protein; Identified by match to protein family HMM PF00023.
  
 0.739
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.679
Your Current Organism:
Borreliella burgdorferi
NCBI taxonomy Id: 224326
Other names: B. burgdorferi B31, Borrelia burgdorferi B31, Borrelia burgdorferi str. B31, Borreliella burgdorferi B31
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