STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmpABasic membrane protein A (bmpA), immunodominant antigen P39; Not known; immunogenic protein; Belongs to the BMP lipoprotein family. (339 aa)    
Predicted Functional Partners:
BB_0678
Ribose/galactose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.947
rbsA
Sugar ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.925
fla
P41; Component of the core of the flagella.
      
 0.920
BB_0679
Ribose/galactose ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.918
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
  
 0.875
bmpC
Basic membrane protein C (bmpC); Identified by match to protein family HMM PF02608.
 
   
0.838
rpsL
Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
     
 0.719
BB_0108
Basic membrane protein; Identified by match to protein family HMM PF00639; match to protein family HMM PF09312.
      
 0.594
bmpB
Basic membrane protein B (bmpB); Identified by match to protein family HMM PF02608.
 
   
0.590
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
     
 0.563
Your Current Organism:
Borreliella burgdorferi
NCBI taxonomy Id: 224326
Other names: B. burgdorferi B31, Borrelia burgdorferi B31, Borrelia burgdorferi str. B31, Borreliella burgdorferi B31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.