Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BB_0401Glutamate transporter, putative; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (400 aa)    
Predicted Functional Partners:
BB_0400
Conserved hypothetical protein.
 
 
 
 0.920
BB_0170
Conserved hypothetical protein.
 
     0.823
p83/100
Borrelia P83/P100 antigen; Identified by match to protein family HMM PF05262.
 
     0.794
BB_0413
Conserved hypothetical integral membrane protein; Identified by match to protein family HMM PF01148.
 
     0.787
BB_0507
Conserved hypothetical protein.
  
   
 0.787
BB_0261
Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
 
   0.780
BB_0455
DNA polymerase III, delta subunit superfamily; Identified by match to protein family HMM PF06144.
  
   
 0.777
BB_0838
Conserved hypothetical protein.
  
     0.773
BB_0783
Conserved hypothetical protein.
  
     0.770
BB_0512
Conserved hypothetical protein.
  
    0.768
Your Current Organism:
Borreliella burgdorferi
NCBI taxonomy Id: 224326
Other names: B. burgdorferi B31, Borrelia burgdorferi B31, Borrelia burgdorferi str. B31, Borreliella burgdorferi B31
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