Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BB_0404Conserved hypothetical protein. (138 aa)    
Predicted Functional Partners:
BB_0405
Conserved hypothetical protein.
     
 0.960
BB_0102
Conserved hypothetical protein.
      
 0.906
BB_0406
Conserved hypothetical protein.
     
 0.876
BB_0397
Conserved hypothetical protein.
      
 0.865
BB_0398
Lipoprotein, putative.
      
 0.865
BB_0360
Conserved hypothetical protein.
      
 0.828
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
      
 0.800
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
      
 0.620
pstS
Phosphate ABC transporter, periplasmic phosphate-binding protein; Binds inorganic phosphate with a Kd of 1.2 uM. Part of the ABC transporter complex PstSACB involved in phosphate import (Probable).
      
 0.582
BB_0403
Conserved hypothetical protein.
       0.486
Your Current Organism:
Borreliella burgdorferi
NCBI taxonomy Id: 224326
Other names: B. burgdorferi B31, Borrelia burgdorferi B31, Borrelia burgdorferi str. B31, Borreliella burgdorferi B31
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