Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Abm4_0248 | Abm4_0249 | Abm4_0248 | Abm4_0249 | Hypothetical protein. | PUA domain-containing protein. | 0.709 |
Abm4_0248 | tgtA | Abm4_0248 | Abm4_1021 | Hypothetical protein. | Archaeosine tRNA-ribosyltransferase TgtA; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. | 0.557 |
Abm4_0249 | Abm4_0248 | Abm4_0249 | Abm4_0248 | PUA domain-containing protein. | Hypothetical protein. | 0.709 |
Abm4_0249 | Abm4_0412 | Abm4_0249 | Abm4_0412 | PUA domain-containing protein. | HTH domain-containing protein. | 0.647 |
Abm4_0249 | Abm4_0515 | Abm4_0249 | Abm4_0515 | PUA domain-containing protein. | Hypothetical protein. | 0.666 |
Abm4_0249 | Abm4_1207 | Abm4_0249 | Abm4_1207 | PUA domain-containing protein. | Hypothetical protein; Belongs to the UPF0179 family. | 0.697 |
Abm4_0249 | Abm4_1392 | Abm4_0249 | Abm4_1392 | PUA domain-containing protein. | NMD3 family protein. | 0.670 |
Abm4_0249 | Abm4_1419 | Abm4_0249 | Abm4_1419 | PUA domain-containing protein. | Radical SAM domain-containing protein. | 0.770 |
Abm4_0249 | Abm4_1640 | Abm4_0249 | Abm4_1640 | PUA domain-containing protein. | Hypothetical protein. | 0.665 |
Abm4_0249 | rpl40e | Abm4_0249 | Abm4_0884 | PUA domain-containing protein. | Ribosomal protein L40e Rpl40e; Belongs to the eukaryotic ribosomal protein eL40 family. | 0.715 |
Abm4_0249 | rps24e | Abm4_0249 | Abm4_0720 | PUA domain-containing protein. | Ribosomal protein S24e Rps24e; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.682 |
Abm4_0249 | tgtA | Abm4_0249 | Abm4_1021 | PUA domain-containing protein. | Archaeosine tRNA-ribosyltransferase TgtA; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. | 0.769 |
Abm4_0412 | Abm4_0249 | Abm4_0412 | Abm4_0249 | HTH domain-containing protein. | PUA domain-containing protein. | 0.647 |
Abm4_0412 | Abm4_0515 | Abm4_0412 | Abm4_0515 | HTH domain-containing protein. | Hypothetical protein. | 0.576 |
Abm4_0412 | Abm4_1207 | Abm4_0412 | Abm4_1207 | HTH domain-containing protein. | Hypothetical protein; Belongs to the UPF0179 family. | 0.611 |
Abm4_0412 | Abm4_1392 | Abm4_0412 | Abm4_1392 | HTH domain-containing protein. | NMD3 family protein. | 0.643 |
Abm4_0412 | Abm4_1419 | Abm4_0412 | Abm4_1419 | HTH domain-containing protein. | Radical SAM domain-containing protein. | 0.639 |
Abm4_0412 | Abm4_1640 | Abm4_0412 | Abm4_1640 | HTH domain-containing protein. | Hypothetical protein. | 0.409 |
Abm4_0412 | rpl40e | Abm4_0412 | Abm4_0884 | HTH domain-containing protein. | Ribosomal protein L40e Rpl40e; Belongs to the eukaryotic ribosomal protein eL40 family. | 0.421 |
Abm4_0412 | rps24e | Abm4_0412 | Abm4_0720 | HTH domain-containing protein. | Ribosomal protein S24e Rps24e; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.523 |
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