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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND87766.1Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1154 aa)    
Predicted Functional Partners:
AND87767.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
AND93618.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.713
AND94591.1
Guanylyl cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.701
AND87765.1
Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.693
AND88095.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.660
AND86928.1
Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.654
AND88130.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.650
AND88308.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.647
AND94072.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.646
AND90265.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.635
Your Current Organism:
Bradyrhizobium diazoefficiens
NCBI taxonomy Id: 224911
Other names: B. diazoefficiens USDA 110, Bradyrhizobium diazoefficiens USDA 110, Bradyrhizobium japonicum USDA 110
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