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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND89673.1Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (81 aa)    
Predicted Functional Partners:
AND89674.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.796
AND89672.1
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.606
AND87559.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.540
AND87797.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.540
AND89258.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.540
AND90211.1
Polymerase; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
     
  0.540
AND90292.1
Polymerase; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
     
  0.540
AND91889.1
Polymerase; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
     
  0.540
AND92893.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.540
AND93207.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.540
Your Current Organism:
Bradyrhizobium diazoefficiens
NCBI taxonomy Id: 224911
Other names: B. diazoefficiens USDA 110, Bradyrhizobium diazoefficiens USDA 110, Bradyrhizobium japonicum USDA 110
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