STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palPeptidoglycan-associated lipoprotein precursor; COG2885; surface antigen; PPL. (173 aa)    
Predicted Functional Partners:
ptsH
Phosphocarrier protein HPr; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain.
   
    0.865
flgH
Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
 
 0.855
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
   
  
 0.824
flgC
Flagellar basal-body rod protein FlgC; COG1558; putative proximal rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.814
flgG
Flagellar basal-body rod protein FlgG; COG1749; distal rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.797
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction.
   
   0.790
fliR
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis; Belongs to the FliR/MopE/SpaR family.
    
 
 0.754
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin (By similarity); Belongs to the type III secretion exporter family.
    
 
 0.753
flgF
Flagellar basal-body rod protein FlgF; COG1749; Belongs to the flagella basal body rod proteins family.
    
 
 0.752
fliE
Flagellar hook-basal body complex protein FliE; COG1677.
   
   0.748
Your Current Organism:
Buchnera aphidicola Bp
NCBI taxonomy Id: 224915
Other names: B. aphidicola str. Bp (Baizongia pistaciae), Buchnera aphidicola (subsp. Baizongia pistaciae), Buchnera aphidicola str. Bp (Baizongia pistaciae)
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