STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbAThiol:disulfide interchange protein DsbA precursor; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins (By similarity). (211 aa)    
Predicted Functional Partners:
polA
Putative 5'-3' exonuclease; 5'-3' exonuclease acting preferentially on double-stranded DNA.
     
 0.845
ppiD
Peptidyl-prolyl cis-trans isomerase D; PPIases accelerate the folding of proteins.
  
 
 0.772
yfgM
Hypothetical protein.
  
    0.728
uspA
Universal stress protein; Required for resistance to DNA-damaging agents.
  
     0.725
yhfC
Putative transport; COG0477.
  
     0.705
yciC
Hypothetical protein.
  
     0.704
ychA
Hypothetical protein ychA; COG2912; Belongs to the UPF0162 family.
  
     0.696
yb2331
Hypothetical protein; COG2840; Belongs to the UPF0115 family.
  
     0.613
mutH
MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair; Belongs to the MutH family.
  
     0.603
holA
DNA polymerase III delta subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The delta subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA (By similarity).
  
     0.593
Your Current Organism:
Buchnera aphidicola Bp
NCBI taxonomy Id: 224915
Other names: B. aphidicola str. Bp (Baizongia pistaciae), Buchnera aphidicola (subsp. Baizongia pistaciae), Buchnera aphidicola str. Bp (Baizongia pistaciae)
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