STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSYNT_595Unannotated protein. (574 aa)    
Predicted Functional Partners:
TSYNT_8281
Unannotated protein.
   
 0.996
TSYNT_9112
Unannotated protein.
 
 
 0.996
TSYNT_596
Unannotated protein.
 
 0.982
TSYNT_594
Unannotated protein.
 
     0.967
rnfB
Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.876
TSYNT_9111
Unannotated protein.
 
 
 0.842
TSYNT_8280
Unannotated protein.
 
0.831
TSYNT_9113
Unannotated protein.
 
 
0.815
TSYNT_7151
Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
     
 0.767
TSYNT_9196
Unannotated protein.
   
 0.687
Your Current Organism:
Tepidanaerobacter syntrophicus
NCBI taxonomy Id: 224999
Other names: DSM 15584, JCM 12098, NBRC 100060, T. syntrophicus, Tepidanaerobacter syntrophicus Sekiguchi et al. 2006, anaerobic syntrophic bacterium JE, anaerobic syntrophic bacterium JL, anaerobic syntrophic bacterium OL, strain JL
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.