Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_5169 | TSYNT_5234 | GCA_001485475_00325 | GCA_001485475_00389 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.905 |
TSYNT_5169 | TSYNT_5253 | GCA_001485475_00325 | GCA_001485475_00408 | Unannotated protein. | Unannotated protein. | 0.678 |
TSYNT_5169 | TSYNT_6294 | GCA_001485475_00325 | GCA_001485475_00919 | Unannotated protein. | Unannotated protein. | 0.942 |
TSYNT_5169 | TSYNT_7497 | GCA_001485475_00325 | GCA_001485475_01488 | Unannotated protein. | Unannotated protein; Belongs to the sulfur carrier protein TusA family. | 0.931 |
TSYNT_5169 | TSYNT_9160 | GCA_001485475_00325 | GCA_001485475_01946 | Unannotated protein. | Unannotated protein. | 0.681 |
TSYNT_5169 | TSYNT_9322 | GCA_001485475_00325 | GCA_001485475_02105 | Unannotated protein. | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.566 |
TSYNT_5169 | TSYNT_9363 | GCA_001485475_00325 | GCA_001485475_02143 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.752 |
TSYNT_5169 | TSYNT_9431 | GCA_001485475_00325 | GCA_001485475_02211 | Unannotated protein. | Unannotated protein. | 0.496 |
TSYNT_5234 | TSYNT_5169 | GCA_001485475_00389 | GCA_001485475_00325 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein. | 0.905 |
TSYNT_5234 | TSYNT_5253 | GCA_001485475_00389 | GCA_001485475_00408 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein. | 0.904 |
TSYNT_5234 | TSYNT_6294 | GCA_001485475_00389 | GCA_001485475_00919 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein. | 0.917 |
TSYNT_5234 | TSYNT_7497 | GCA_001485475_00389 | GCA_001485475_01488 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein; Belongs to the sulfur carrier protein TusA family. | 0.953 |
TSYNT_5234 | TSYNT_8185 | GCA_001485475_00389 | GCA_001485475_01685 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein. | 0.902 |
TSYNT_5234 | TSYNT_9160 | GCA_001485475_00389 | GCA_001485475_01946 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein. | 0.889 |
TSYNT_5234 | TSYNT_9322 | GCA_001485475_00389 | GCA_001485475_02105 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.858 |
TSYNT_5234 | TSYNT_9363 | GCA_001485475_00389 | GCA_001485475_02143 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.903 |
TSYNT_5234 | TSYNT_9431 | GCA_001485475_00389 | GCA_001485475_02211 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein. | 0.860 |
TSYNT_5234 | serC | GCA_001485475_00389 | GCA_001485475_00742 | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.874 |
TSYNT_5253 | TSYNT_5169 | GCA_001485475_00408 | GCA_001485475_00325 | Unannotated protein. | Unannotated protein. | 0.678 |
TSYNT_5253 | TSYNT_5234 | GCA_001485475_00408 | GCA_001485475_00389 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.904 |
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