Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_5466 | TSYNT_6114 | GCA_001485475_00619 | GCA_001485475_00741 | Unannotated protein; Belongs to the IlvD/Edd family. | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.925 |
TSYNT_5466 | TSYNT_7275 | GCA_001485475_00619 | GCA_001485475_01272 | Unannotated protein; Belongs to the IlvD/Edd family. | Unannotated protein. | 0.880 |
TSYNT_5466 | TSYNT_9127 | GCA_001485475_00619 | GCA_001485475_01914 | Unannotated protein; Belongs to the IlvD/Edd family. | Unannotated protein. | 0.777 |
TSYNT_5466 | TSYNT_9285 | GCA_001485475_00619 | GCA_001485475_02068 | Unannotated protein; Belongs to the IlvD/Edd family. | Unannotated protein. | 0.412 |
TSYNT_5466 | ilvE | GCA_001485475_00619 | GCA_001485475_00419 | Unannotated protein; Belongs to the IlvD/Edd family. | Unannotated protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.969 |
TSYNT_5466 | leuA | GCA_001485475_00619 | GCA_001485475_00425 | Unannotated protein; Belongs to the IlvD/Edd family. | Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.967 |
TSYNT_5466 | thrB | GCA_001485475_00619 | GCA_001485475_02070 | Unannotated protein; Belongs to the IlvD/Edd family. | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.561 |
TSYNT_6114 | TSYNT_5466 | GCA_001485475_00741 | GCA_001485475_00619 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.925 |
TSYNT_6114 | TSYNT_7151 | GCA_001485475_00741 | GCA_001485475_01148 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | 0.954 |
TSYNT_6114 | TSYNT_7275 | GCA_001485475_00741 | GCA_001485475_01272 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein. | 0.511 |
TSYNT_6114 | ilvD | GCA_001485475_00741 | GCA_001485475_00992 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.924 |
TSYNT_6114 | ilvE | GCA_001485475_00741 | GCA_001485475_00419 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.980 |
TSYNT_6114 | leuA | GCA_001485475_00741 | GCA_001485475_00425 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.872 |
TSYNT_7151 | TSYNT_6114 | GCA_001485475_01148 | GCA_001485475_00741 | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.954 |
TSYNT_7151 | TSYNT_7275 | GCA_001485475_01148 | GCA_001485475_01272 | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | Unannotated protein. | 0.944 |
TSYNT_7151 | TSYNT_8150 | GCA_001485475_01148 | GCA_001485475_01651 | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | Unannotated protein. | 0.410 |
TSYNT_7151 | TSYNT_9127 | GCA_001485475_01148 | GCA_001485475_01914 | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | Unannotated protein. | 0.944 |
TSYNT_7151 | TSYNT_9285 | GCA_001485475_01148 | GCA_001485475_02068 | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | Unannotated protein. | 0.423 |
TSYNT_7151 | ilvE | GCA_001485475_01148 | GCA_001485475_00419 | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | Unannotated protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.915 |
TSYNT_7151 | leuA | GCA_001485475_01148 | GCA_001485475_00425 | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.954 |
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