Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_5440 | TSYNT_5452 | GCA_001485475_00593 | GCA_001485475_00605 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.890 |
TSYNT_5452 | TSYNT_5440 | GCA_001485475_00605 | GCA_001485475_00593 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.890 |
TSYNT_5452 | TSYNT_5454 | GCA_001485475_00605 | GCA_001485475_00607 | Unannotated protein. | Unannotated protein. | 0.998 |
TSYNT_5452 | TSYNT_6293 | GCA_001485475_00605 | GCA_001485475_00918 | Unannotated protein. | Unannotated protein. | 0.900 |
TSYNT_5452 | TSYNT_8173 | GCA_001485475_00605 | GCA_001485475_01673 | Unannotated protein. | Unannotated protein. | 0.900 |
TSYNT_5452 | TSYNT_8196 | GCA_001485475_00605 | GCA_001485475_01695 | Unannotated protein. | Unannotated protein. | 0.893 |
TSYNT_5452 | TSYNT_9277 | GCA_001485475_00605 | GCA_001485475_02060 | Unannotated protein. | Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.958 |
TSYNT_5452 | ecfA-2 | GCA_001485475_00605 | GCA_001485475_00670 | Unannotated protein. | Unannotated protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.901 |
TSYNT_5452 | ftsE | GCA_001485475_00605 | GCA_001485475_01807 | Unannotated protein. | Unannotated protein; Part of the ABC transporter FtsEX involved in cellular division. | 0.912 |
TSYNT_5452 | lolD | GCA_001485475_00605 | GCA_001485475_02061 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.998 |
TSYNT_5452 | macB | GCA_001485475_00605 | GCA_001485475_00606 | Unannotated protein. | Unannotated protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.999 |
TSYNT_5454 | TSYNT_5452 | GCA_001485475_00607 | GCA_001485475_00605 | Unannotated protein. | Unannotated protein. | 0.998 |
TSYNT_5454 | TSYNT_9277 | GCA_001485475_00607 | GCA_001485475_02060 | Unannotated protein. | Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.522 |
TSYNT_5454 | lolD | GCA_001485475_00607 | GCA_001485475_02061 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.994 |
TSYNT_5454 | macB | GCA_001485475_00607 | GCA_001485475_00606 | Unannotated protein. | Unannotated protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.998 |
TSYNT_6293 | TSYNT_5452 | GCA_001485475_00918 | GCA_001485475_00605 | Unannotated protein. | Unannotated protein. | 0.900 |
TSYNT_8173 | TSYNT_5452 | GCA_001485475_01673 | GCA_001485475_00605 | Unannotated protein. | Unannotated protein. | 0.900 |
TSYNT_8196 | TSYNT_5452 | GCA_001485475_01695 | GCA_001485475_00605 | Unannotated protein. | Unannotated protein. | 0.893 |
TSYNT_9277 | TSYNT_5452 | GCA_001485475_02060 | GCA_001485475_00605 | Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Unannotated protein. | 0.958 |
TSYNT_9277 | TSYNT_5454 | GCA_001485475_02060 | GCA_001485475_00607 | Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Unannotated protein. | 0.522 |
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