Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_598 | TSYNT_6186 | GCA_001485475_00254 | GCA_001485475_00812 | Unannotated protein. | Unannotated protein. | 0.619 |
TSYNT_598 | metG | GCA_001485475_00254 | GCA_001485475_00815 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.410 |
TSYNT_598 | rsmA | GCA_001485475_00254 | GCA_001485475_00810 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.756 |
TSYNT_6185 | TSYNT_6186 | GCA_001485475_00811 | GCA_001485475_00812 | Unannotated protein. | Unannotated protein. | 0.970 |
TSYNT_6185 | TSYNT_6187 | GCA_001485475_00811 | GCA_001485475_00813 | Unannotated protein. | Unannotated protein. | 0.496 |
TSYNT_6185 | TSYNT_6188 | GCA_001485475_00811 | GCA_001485475_00814 | Unannotated protein. | Unannotated protein; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.519 |
TSYNT_6185 | metG | GCA_001485475_00811 | GCA_001485475_00815 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.533 |
TSYNT_6185 | rsmA | GCA_001485475_00811 | GCA_001485475_00810 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.600 |
TSYNT_6186 | TSYNT_598 | GCA_001485475_00812 | GCA_001485475_00254 | Unannotated protein. | Unannotated protein. | 0.619 |
TSYNT_6186 | TSYNT_6185 | GCA_001485475_00812 | GCA_001485475_00811 | Unannotated protein. | Unannotated protein. | 0.970 |
TSYNT_6186 | TSYNT_6187 | GCA_001485475_00812 | GCA_001485475_00813 | Unannotated protein. | Unannotated protein. | 0.752 |
TSYNT_6186 | TSYNT_6188 | GCA_001485475_00812 | GCA_001485475_00814 | Unannotated protein. | Unannotated protein; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. | 0.752 |
TSYNT_6186 | TSYNT_9561 | GCA_001485475_00812 | GCA_001485475_02341 | Unannotated protein. | Unannotated protein. | 0.705 |
TSYNT_6186 | acpP | GCA_001485475_00812 | GCA_001485475_02339 | Unannotated protein. | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.708 |
TSYNT_6186 | metG | GCA_001485475_00812 | GCA_001485475_00815 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.943 |
TSYNT_6186 | polA | GCA_001485475_00812 | GCA_001485475_01967 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.593 |
TSYNT_6186 | rsmA | GCA_001485475_00812 | GCA_001485475_00810 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.890 |
TSYNT_6186 | tmk | GCA_001485475_00812 | GCA_001485475_00858 | Unannotated protein. | Unannotated protein; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.680 |
TSYNT_6187 | TSYNT_6185 | GCA_001485475_00813 | GCA_001485475_00811 | Unannotated protein. | Unannotated protein. | 0.496 |
TSYNT_6187 | TSYNT_6186 | GCA_001485475_00813 | GCA_001485475_00812 | Unannotated protein. | Unannotated protein. | 0.752 |
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