Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_5278 | TSYNT_6230 | GCA_001485475_00432 | GCA_001485475_00855 | Unannotated protein. | Unannotated protein. | 0.986 |
TSYNT_5278 | TSYNT_6241 | GCA_001485475_00432 | GCA_001485475_00866 | Unannotated protein. | Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] | 0.990 |
TSYNT_5278 | TSYNT_6267 | GCA_001485475_00432 | GCA_001485475_00892 | Unannotated protein. | Unannotated protein. | 0.943 |
TSYNT_5278 | TSYNT_886 | GCA_001485475_00432 | GCA_001485475_01588 | Unannotated protein. | Unannotated protein. | 0.989 |
TSYNT_5278 | TSYNT_9138 | GCA_001485475_00432 | GCA_001485475_01924 | Unannotated protein. | Unannotated protein. | 0.961 |
TSYNT_5278 | dnaX | GCA_001485475_00432 | GCA_001485475_01663 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.989 |
TSYNT_5278 | polC | GCA_001485475_00432 | GCA_001485475_02260 | Unannotated protein. | Unannotated protein; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.896 |
TSYNT_6229 | TSYNT_6230 | GCA_001485475_00854 | GCA_001485475_00855 | Unannotated protein. | Unannotated protein. | 0.963 |
TSYNT_6229 | TSYNT_6232 | GCA_001485475_00854 | GCA_001485475_00857 | Unannotated protein. | Unannotated protein. | 0.873 |
TSYNT_6229 | TSYNT_6241 | GCA_001485475_00854 | GCA_001485475_00866 | Unannotated protein. | Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] | 0.400 |
TSYNT_6229 | tmk | GCA_001485475_00854 | GCA_001485475_00858 | Unannotated protein. | Unannotated protein; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.948 |
TSYNT_6230 | TSYNT_5278 | GCA_001485475_00855 | GCA_001485475_00432 | Unannotated protein. | Unannotated protein. | 0.986 |
TSYNT_6230 | TSYNT_6229 | GCA_001485475_00855 | GCA_001485475_00854 | Unannotated protein. | Unannotated protein. | 0.963 |
TSYNT_6230 | TSYNT_6232 | GCA_001485475_00855 | GCA_001485475_00857 | Unannotated protein. | Unannotated protein. | 0.864 |
TSYNT_6230 | TSYNT_6241 | GCA_001485475_00855 | GCA_001485475_00866 | Unannotated protein. | Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] | 0.994 |
TSYNT_6230 | TSYNT_6267 | GCA_001485475_00855 | GCA_001485475_00892 | Unannotated protein. | Unannotated protein. | 0.906 |
TSYNT_6230 | TSYNT_886 | GCA_001485475_00855 | GCA_001485475_01588 | Unannotated protein. | Unannotated protein. | 0.991 |
TSYNT_6230 | TSYNT_9138 | GCA_001485475_00855 | GCA_001485475_01924 | Unannotated protein. | Unannotated protein. | 0.935 |
TSYNT_6230 | dnaX | GCA_001485475_00855 | GCA_001485475_01663 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.932 |
TSYNT_6230 | polC | GCA_001485475_00855 | GCA_001485475_02260 | Unannotated protein. | Unannotated protein; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.873 |
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