Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_6264 | TSYNT_6265 | GCA_001485475_00889 | GCA_001485475_00890 | Unannotated protein. | Unannotated protein. | 0.854 |
TSYNT_6264 | TSYNT_6267 | GCA_001485475_00889 | GCA_001485475_00892 | Unannotated protein. | Unannotated protein. | 0.698 |
TSYNT_6264 | TSYNT_6269 | GCA_001485475_00889 | GCA_001485475_00894 | Unannotated protein. | Unannotated protein. | 0.600 |
TSYNT_6264 | TSYNT_6270 | GCA_001485475_00889 | GCA_001485475_00895 | Unannotated protein. | Unannotated protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | 0.563 |
TSYNT_6264 | TSYNT_6272 | GCA_001485475_00889 | GCA_001485475_00897 | Unannotated protein. | Unannotated protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.558 |
TSYNT_6264 | rplI | GCA_001485475_00889 | GCA_001485475_00896 | Unannotated protein. | Unannotated protein; Binds to the 23S rRNA. | 0.566 |
TSYNT_6264 | rpsF | GCA_001485475_00889 | GCA_001485475_00891 | Unannotated protein. | Unannotated protein; Binds together with S18 to 16S ribosomal RNA. | 0.710 |
TSYNT_6264 | rpsR | GCA_001485475_00889 | GCA_001485475_00893 | Unannotated protein. | Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.666 |
TSYNT_6265 | TSYNT_6264 | GCA_001485475_00890 | GCA_001485475_00889 | Unannotated protein. | Unannotated protein. | 0.854 |
TSYNT_6265 | TSYNT_6267 | GCA_001485475_00890 | GCA_001485475_00892 | Unannotated protein. | Unannotated protein. | 0.781 |
TSYNT_6265 | TSYNT_6269 | GCA_001485475_00890 | GCA_001485475_00894 | Unannotated protein. | Unannotated protein. | 0.604 |
TSYNT_6265 | TSYNT_6270 | GCA_001485475_00890 | GCA_001485475_00895 | Unannotated protein. | Unannotated protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | 0.686 |
TSYNT_6265 | TSYNT_6272 | GCA_001485475_00890 | GCA_001485475_00897 | Unannotated protein. | Unannotated protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.565 |
TSYNT_6265 | TSYNT_9357 | GCA_001485475_00890 | GCA_001485475_02138 | Unannotated protein. | Unannotated protein; Belongs to the UPF0297 family. | 0.736 |
TSYNT_6265 | rplI | GCA_001485475_00890 | GCA_001485475_00896 | Unannotated protein. | Unannotated protein; Binds to the 23S rRNA. | 0.566 |
TSYNT_6265 | rpsF | GCA_001485475_00890 | GCA_001485475_00891 | Unannotated protein. | Unannotated protein; Binds together with S18 to 16S ribosomal RNA. | 0.710 |
TSYNT_6265 | rpsR | GCA_001485475_00890 | GCA_001485475_00893 | Unannotated protein. | Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.661 |
TSYNT_6267 | TSYNT_6264 | GCA_001485475_00892 | GCA_001485475_00889 | Unannotated protein. | Unannotated protein. | 0.698 |
TSYNT_6267 | TSYNT_6265 | GCA_001485475_00892 | GCA_001485475_00890 | Unannotated protein. | Unannotated protein. | 0.781 |
TSYNT_6267 | TSYNT_6269 | GCA_001485475_00892 | GCA_001485475_00894 | Unannotated protein. | Unannotated protein. | 0.701 |
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