Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_7333 | TSYNT_7334 | GCA_001485475_01330 | GCA_001485475_01331 | Unannotated protein. | Unannotated protein; Belongs to the ALAD family. | 0.995 |
TSYNT_7333 | TSYNT_7335 | GCA_001485475_01330 | GCA_001485475_01332 | Unannotated protein. | Unannotated protein. | 0.999 |
TSYNT_7333 | TSYNT_7338 | GCA_001485475_01330 | GCA_001485475_01335 | Unannotated protein. | Unannotated protein. | 0.991 |
TSYNT_7333 | TSYNT_7341 | GCA_001485475_01330 | GCA_001485475_01338 | Unannotated protein. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.996 |
TSYNT_7333 | TSYNT_7347 | GCA_001485475_01330 | GCA_001485475_01344 | Unannotated protein. | Unannotated protein. | 0.990 |
TSYNT_7333 | cbiA | GCA_001485475_01330 | GCA_001485475_01345 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.912 |
TSYNT_7333 | gltX | GCA_001485475_01330 | GCA_001485475_01084 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.578 |
TSYNT_7333 | hemA | GCA_001485475_01330 | GCA_001485475_01334 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.990 |
TSYNT_7333 | hemC | GCA_001485475_01330 | GCA_001485475_01333 | Unannotated protein. | Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.997 |
TSYNT_7333 | hemL | GCA_001485475_01330 | GCA_001485475_01329 | Unannotated protein. | Unannotated protein. | 0.996 |
TSYNT_7334 | TSYNT_7333 | GCA_001485475_01331 | GCA_001485475_01330 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein. | 0.995 |
TSYNT_7334 | TSYNT_7335 | GCA_001485475_01331 | GCA_001485475_01332 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein. | 0.999 |
TSYNT_7334 | TSYNT_7338 | GCA_001485475_01331 | GCA_001485475_01335 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein. | 0.854 |
TSYNT_7334 | TSYNT_7341 | GCA_001485475_01331 | GCA_001485475_01338 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.888 |
TSYNT_7334 | TSYNT_7347 | GCA_001485475_01331 | GCA_001485475_01344 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein. | 0.864 |
TSYNT_7334 | cbiA | GCA_001485475_01331 | GCA_001485475_01345 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.870 |
TSYNT_7334 | hemA | GCA_001485475_01331 | GCA_001485475_01334 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.981 |
TSYNT_7334 | hemC | GCA_001485475_01331 | GCA_001485475_01333 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.999 |
TSYNT_7334 | hemL | GCA_001485475_01331 | GCA_001485475_01329 | Unannotated protein; Belongs to the ALAD family. | Unannotated protein. | 0.998 |
TSYNT_7335 | TSYNT_7333 | GCA_001485475_01332 | GCA_001485475_01330 | Unannotated protein. | Unannotated protein. | 0.999 |
page 1 of 5