STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiAUnannotated protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (457 aa)    
Predicted Functional Partners:
TSYNT_7346
Unannotated protein.
 
 0.999
TSYNT_7338
Unannotated protein.
  
 0.990
TSYNT_7341
Unannotated protein; Belongs to the precorrin methyltransferase family.
 
  
 0.989
cobQ
Unannotated protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 0.989
TSYNT_7340
Unannotated protein.
 
  
 0.988
TSYNT_7342
Unannotated protein; Belongs to the precorrin methyltransferase family.
  
 0.988
cbiD
Unannotated protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.988
TSYNT_7343
Unannotated protein.
  
 0.987
TSYNT_7339
Unannotated protein.
 
  
 0.986
cobT
Unannotated protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 0.984
Your Current Organism:
Tepidanaerobacter syntrophicus
NCBI taxonomy Id: 224999
Other names: DSM 15584, JCM 12098, NBRC 100060, T. syntrophicus, Tepidanaerobacter syntrophicus Sekiguchi et al. 2006, anaerobic syntrophic bacterium JE, anaerobic syntrophic bacterium JL, anaerobic syntrophic bacterium OL, strain JL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.