Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_1103 | TSYNT_7499 | GCA_001485475_00101 | GCA_001485475_01490 | Unannotated protein. | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.478 |
TSYNT_1103 | TSYNT_7500 | GCA_001485475_00101 | GCA_001485475_01491 | Unannotated protein. | Unannotated protein. | 0.487 |
TSYNT_1103 | dnaK | GCA_001485475_00101 | GCA_001485475_01582 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.412 |
TSYNT_1103 | gyrA | GCA_001485475_00101 | GCA_001485475_00860 | Unannotated protein. | Unannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.430 |
TSYNT_6209 | TSYNT_7499 | GCA_001485475_00834 | GCA_001485475_01490 | Unannotated protein. | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.436 |
TSYNT_7498 | TSYNT_7499 | GCA_001485475_01489 | GCA_001485475_01490 | Unannotated protein. | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.991 |
TSYNT_7498 | TSYNT_7500 | GCA_001485475_01489 | GCA_001485475_01491 | Unannotated protein. | Unannotated protein. | 0.713 |
TSYNT_7499 | TSYNT_1103 | GCA_001485475_01490 | GCA_001485475_00101 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein. | 0.478 |
TSYNT_7499 | TSYNT_6209 | GCA_001485475_01490 | GCA_001485475_00834 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein. | 0.436 |
TSYNT_7499 | TSYNT_7498 | GCA_001485475_01490 | GCA_001485475_01489 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein. | 0.991 |
TSYNT_7499 | TSYNT_7500 | GCA_001485475_01490 | GCA_001485475_01491 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein. | 0.690 |
TSYNT_7499 | dnaK | GCA_001485475_01490 | GCA_001485475_01582 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.430 |
TSYNT_7499 | gyrA | GCA_001485475_01490 | GCA_001485475_00860 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.450 |
TSYNT_7499 | leuC | GCA_001485475_01490 | GCA_001485475_00424 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.436 |
TSYNT_7499 | leuS | GCA_001485475_01490 | GCA_001485475_02042 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.571 |
TSYNT_7499 | uvrA | GCA_001485475_01490 | GCA_001485475_01817 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.438 |
TSYNT_7499 | valS | GCA_001485475_01490 | GCA_001485475_02057 | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Unannotated protein; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.444 |
TSYNT_7500 | TSYNT_1103 | GCA_001485475_01491 | GCA_001485475_00101 | Unannotated protein. | Unannotated protein. | 0.487 |
TSYNT_7500 | TSYNT_7498 | GCA_001485475_01491 | GCA_001485475_01489 | Unannotated protein. | Unannotated protein. | 0.713 |
TSYNT_7500 | TSYNT_7499 | GCA_001485475_01491 | GCA_001485475_01490 | Unannotated protein. | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.690 |
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