Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_7335 | TSYNT_7340 | GCA_001485475_01332 | GCA_001485475_01337 | Unannotated protein. | Unannotated protein. | 0.984 |
TSYNT_7335 | TSYNT_7350 | GCA_001485475_01332 | GCA_001485475_01347 | Unannotated protein. | Unannotated protein. | 0.889 |
TSYNT_7335 | TSYNT_952 | GCA_001485475_01332 | GCA_001485475_01840 | Unannotated protein. | Unannotated protein. | 0.793 |
TSYNT_7335 | TSYNT_953 | GCA_001485475_01332 | GCA_001485475_01841 | Unannotated protein. | Unannotated protein. | 0.504 |
TSYNT_7335 | TSYNT_957 | GCA_001485475_01332 | GCA_001485475_01845 | Unannotated protein. | Unannotated protein; Belongs to the phosphoglycerate mutase family. | 0.516 |
TSYNT_7335 | cbiA | GCA_001485475_01332 | GCA_001485475_01345 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.974 |
TSYNT_7335 | cobD | GCA_001485475_01332 | GCA_001485475_01843 | Unannotated protein. | Unannotated protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.763 |
TSYNT_7335 | cobQ | GCA_001485475_01332 | GCA_001485475_02045 | Unannotated protein. | Unannotated protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.766 |
TSYNT_7335 | cobS | GCA_001485475_01332 | GCA_001485475_01844 | Unannotated protein. | Unannotated protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.766 |
TSYNT_7335 | cobT | GCA_001485475_01332 | GCA_001485475_01590 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.755 |
TSYNT_7340 | TSYNT_7335 | GCA_001485475_01337 | GCA_001485475_01332 | Unannotated protein. | Unannotated protein. | 0.984 |
TSYNT_7340 | TSYNT_7350 | GCA_001485475_01337 | GCA_001485475_01347 | Unannotated protein. | Unannotated protein. | 0.917 |
TSYNT_7340 | TSYNT_952 | GCA_001485475_01337 | GCA_001485475_01840 | Unannotated protein. | Unannotated protein. | 0.728 |
TSYNT_7340 | TSYNT_953 | GCA_001485475_01337 | GCA_001485475_01841 | Unannotated protein. | Unannotated protein. | 0.996 |
TSYNT_7340 | cbiA | GCA_001485475_01337 | GCA_001485475_01345 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.988 |
TSYNT_7340 | cobD | GCA_001485475_01337 | GCA_001485475_01843 | Unannotated protein. | Unannotated protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.779 |
TSYNT_7340 | cobQ | GCA_001485475_01337 | GCA_001485475_02045 | Unannotated protein. | Unannotated protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.792 |
TSYNT_7340 | cobS | GCA_001485475_01337 | GCA_001485475_01844 | Unannotated protein. | Unannotated protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.752 |
TSYNT_7340 | cobT | GCA_001485475_01337 | GCA_001485475_01590 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.749 |
TSYNT_7350 | TSYNT_7335 | GCA_001485475_01347 | GCA_001485475_01332 | Unannotated protein. | Unannotated protein. | 0.889 |
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