node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_6230 | TSYNT_8161 | GCA_001485475_00855 | GCA_001485475_01662 | Unannotated protein. | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.610 |
TSYNT_6230 | cinA | GCA_001485475_00855 | GCA_001485475_02243 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.446 |
TSYNT_6230 | dnaX | GCA_001485475_00855 | GCA_001485475_01663 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.932 |
TSYNT_6230 | recR | GCA_001485475_00855 | GCA_001485475_01661 | Unannotated protein. | Unannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.829 |
TSYNT_6230 | secA | GCA_001485475_00855 | GCA_001485475_00363 | Unannotated protein. | Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.487 |
TSYNT_6230 | secY | GCA_001485475_00855 | GCA_001485475_00681 | Unannotated protein. | Unannotated protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.593 |
TSYNT_8161 | TSYNT_6230 | GCA_001485475_01662 | GCA_001485475_00855 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein. | 0.610 |
TSYNT_8161 | TSYNT_9504 | GCA_001485475_01662 | GCA_001485475_02284 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.552 |
TSYNT_8161 | TSYNT_9569 | GCA_001485475_01662 | GCA_001485475_02349 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein. | 0.628 |
TSYNT_8161 | cinA | GCA_001485475_01662 | GCA_001485475_02243 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein; Belongs to the CinA family. | 0.514 |
TSYNT_8161 | dnaX | GCA_001485475_01662 | GCA_001485475_01663 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.916 |
TSYNT_8161 | ffh | GCA_001485475_01662 | GCA_001485475_02325 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.550 |
TSYNT_8161 | ftsY | GCA_001485475_01662 | GCA_001485475_02334 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.584 |
TSYNT_8161 | recR | GCA_001485475_01662 | GCA_001485475_01661 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.991 |
TSYNT_8161 | secA | GCA_001485475_01662 | GCA_001485475_00363 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.535 |
TSYNT_8161 | secY | GCA_001485475_01662 | GCA_001485475_00681 | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Unannotated protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.502 |
TSYNT_9504 | TSYNT_8161 | GCA_001485475_02284 | GCA_001485475_01662 | Unannotated protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.552 |
TSYNT_9504 | cinA | GCA_001485475_02284 | GCA_001485475_02243 | Unannotated protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Unannotated protein; Belongs to the CinA family. | 0.467 |
TSYNT_9569 | TSYNT_8161 | GCA_001485475_02349 | GCA_001485475_01662 | Unannotated protein. | Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.628 |
TSYNT_9569 | ffh | GCA_001485475_02349 | GCA_001485475_02325 | Unannotated protein. | Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.906 |