Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_7151 | TSYNT_8241 | GCA_001485475_01148 | GCA_001485475_01740 | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | Unannotated protein. | 0.410 |
TSYNT_8240 | TSYNT_8241 | GCA_001485475_01739 | GCA_001485475_01740 | Unannotated protein. | Unannotated protein. | 0.401 |
TSYNT_8241 | TSYNT_7151 | GCA_001485475_01740 | GCA_001485475_01148 | Unannotated protein. | Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. | 0.410 |
TSYNT_8241 | TSYNT_8240 | GCA_001485475_01740 | GCA_001485475_01739 | Unannotated protein. | Unannotated protein. | 0.401 |
TSYNT_8241 | TSYNT_8242 | GCA_001485475_01740 | GCA_001485475_01741 | Unannotated protein. | Unannotated protein. | 0.768 |
TSYNT_8241 | TSYNT_9133 | GCA_001485475_01740 | GCA_001485475_01919 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.414 |
TSYNT_8241 | pyrG | GCA_001485475_01740 | GCA_001485475_01742 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.530 |
TSYNT_8242 | TSYNT_8241 | GCA_001485475_01741 | GCA_001485475_01740 | Unannotated protein. | Unannotated protein. | 0.768 |
TSYNT_8242 | pyrG | GCA_001485475_01741 | GCA_001485475_01742 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.689 |
TSYNT_9133 | TSYNT_8241 | GCA_001485475_01919 | GCA_001485475_01740 | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Unannotated protein. | 0.414 |
TSYNT_9133 | pyrG | GCA_001485475_01919 | GCA_001485475_01742 | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.443 |
pyrG | TSYNT_8241 | GCA_001485475_01742 | GCA_001485475_01740 | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | Unannotated protein. | 0.530 |
pyrG | TSYNT_8242 | GCA_001485475_01742 | GCA_001485475_01741 | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | Unannotated protein. | 0.689 |
pyrG | TSYNT_9133 | GCA_001485475_01742 | GCA_001485475_01919 | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.443 |