STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSYNT_9196Unannotated protein. (106 aa)    
Predicted Functional Partners:
TSYNT_9198
Unannotated protein.
 0.999
TSYNT_8281
Unannotated protein.
  
 0.997
TSYNT_9112
Unannotated protein.
  
 0.997
TSYNT_9197
Unannotated protein.
  
 0.996
TSYNT_9106
Unannotated protein.
   
 0.988
TSYNT_8280
Unannotated protein.
  
 0.985
TSYNT_9199
Unannotated protein.
 
 
 0.974
TSYNT_7151
Unannotated protein; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.965
TSYNT_9200
Unannotated protein.
 
  
 0.965
rnfB
Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.937
Your Current Organism:
Tepidanaerobacter syntrophicus
NCBI taxonomy Id: 224999
Other names: DSM 15584, JCM 12098, NBRC 100060, T. syntrophicus, Tepidanaerobacter syntrophicus Sekiguchi et al. 2006, anaerobic syntrophic bacterium JE, anaerobic syntrophic bacterium JL, anaerobic syntrophic bacterium OL, strain JL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.