Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSYNT_5254 | mtaD | GCA_001485475_00409 | GCA_001485475_00410 | Unannotated protein; Purine nucleoside phosphorylase involved in purine salvage. | Unannotated protein; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. | 0.989 |
TSYNT_5254 | speE | GCA_001485475_00409 | GCA_001485475_00966 | Unannotated protein; Purine nucleoside phosphorylase involved in purine salvage. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.810 |
TSYNT_5254 | speE-2 | GCA_001485475_00409 | GCA_001485475_02193 | Unannotated protein; Purine nucleoside phosphorylase involved in purine salvage. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.810 |
TSYNT_5254 | speH | GCA_001485475_00409 | GCA_001485475_02202 | Unannotated protein; Purine nucleoside phosphorylase involved in purine salvage. | Unannotated protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.405 |
TSYNT_6234 | TSYNT_8266 | GCA_001485475_00859 | GCA_001485475_01765 | Unannotated protein. | Unannotated protein. | 0.839 |
TSYNT_6234 | TSYNT_9414 | GCA_001485475_00859 | GCA_001485475_02194 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.925 |
TSYNT_6234 | speE | GCA_001485475_00859 | GCA_001485475_00966 | Unannotated protein. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.696 |
TSYNT_6234 | speE-2 | GCA_001485475_00859 | GCA_001485475_02193 | Unannotated protein. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.712 |
TSYNT_8266 | TSYNT_6234 | GCA_001485475_01765 | GCA_001485475_00859 | Unannotated protein. | Unannotated protein. | 0.839 |
TSYNT_8266 | TSYNT_9414 | GCA_001485475_01765 | GCA_001485475_02194 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.947 |
TSYNT_8266 | speE | GCA_001485475_01765 | GCA_001485475_00966 | Unannotated protein. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.853 |
TSYNT_8266 | speE-2 | GCA_001485475_01765 | GCA_001485475_02193 | Unannotated protein. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.871 |
TSYNT_9414 | TSYNT_6234 | GCA_001485475_02194 | GCA_001485475_00859 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.925 |
TSYNT_9414 | TSYNT_8266 | GCA_001485475_02194 | GCA_001485475_01765 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.947 |
TSYNT_9414 | TSYNT_9415 | GCA_001485475_02194 | GCA_001485475_02195 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.774 |
TSYNT_9414 | TSYNT_9416 | GCA_001485475_02194 | GCA_001485475_02196 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.689 |
TSYNT_9414 | speE | GCA_001485475_02194 | GCA_001485475_00966 | Unannotated protein; Belongs to the arginase family. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.902 |
TSYNT_9414 | speE-2 | GCA_001485475_02194 | GCA_001485475_02193 | Unannotated protein; Belongs to the arginase family. | Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.976 |
TSYNT_9414 | speH | GCA_001485475_02194 | GCA_001485475_02202 | Unannotated protein; Belongs to the arginase family. | Unannotated protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.611 |
TSYNT_9415 | TSYNT_9414 | GCA_001485475_02195 | GCA_001485475_02194 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.774 |
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