STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSYNT_9499Unannotated protein. (213 aa)    
Predicted Functional Partners:
TSYNT_9501
Unannotated protein.
 
  
 0.928
TSYNT_9497
Unannotated protein.
  
  
 0.919
TSYNT_9498
Unannotated protein.
  
  
 0.910
TSYNT_9509
Unannotated protein.
 
  
 0.900
TSYNT_7220
Unannotated protein.
  
 
 0.899
TSYNT_9510
Unannotated protein.
 
 
 0.890
TSYNT_5201
Unannotated protein.
 
  
 0.887
TSYNT_9494
Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.884
TSYNT_9500
Unannotated protein.
 
    0.879
flhB
Unannotated protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
  
 0.867
Your Current Organism:
Tepidanaerobacter syntrophicus
NCBI taxonomy Id: 224999
Other names: DSM 15584, JCM 12098, NBRC 100060, T. syntrophicus, Tepidanaerobacter syntrophicus Sekiguchi et al. 2006, anaerobic syntrophic bacterium JE, anaerobic syntrophic bacterium JL, anaerobic syntrophic bacterium OL, strain JL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.