Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ44856.1 | SJZ44894.1 | SAMN02745152_00274 | SAMN02745152_00275 | Dihydrofolate synthase / folylpolyglutamate synthase. | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.414 |
SJZ44856.1 | SJZ44925.1 | SAMN02745152_00274 | SAMN02745152_00277 | Dihydrofolate synthase / folylpolyglutamate synthase. | Hypothetical protein. | 0.471 |
SJZ44856.1 | SJZ44974.1 | SAMN02745152_00274 | SAMN02745152_00279 | Dihydrofolate synthase / folylpolyglutamate synthase. | Hypothetical protein. | 0.408 |
SJZ44856.1 | uvrA | SAMN02745152_00274 | SAMN02745152_00276 | Dihydrofolate synthase / folylpolyglutamate synthase. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.464 |
SJZ44894.1 | SJZ44856.1 | SAMN02745152_00275 | SAMN02745152_00274 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Dihydrofolate synthase / folylpolyglutamate synthase. | 0.414 |
SJZ44894.1 | SJZ44925.1 | SAMN02745152_00275 | SAMN02745152_00277 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.742 |
SJZ44894.1 | SJZ44954.1 | SAMN02745152_00275 | SAMN02745152_00278 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Phosphate starvation-inducible protein PhoH. | 0.641 |
SJZ44894.1 | SJZ44974.1 | SAMN02745152_00275 | SAMN02745152_00279 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.630 |
SJZ44894.1 | SJZ45057.1 | SAMN02745152_00275 | SAMN02745152_00281 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | CBS domain-containing protein. | 0.548 |
SJZ44894.1 | SJZ45088.1 | SAMN02745152_00275 | SAMN02745152_00282 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Flp pilus assembly protein TadD, contains TPR repeats. | 0.401 |
SJZ44894.1 | uvrA | SAMN02745152_00275 | SAMN02745152_00276 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.737 |
SJZ44894.1 | ybeY | SAMN02745152_00275 | SAMN02745152_00280 | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.641 |
SJZ44925.1 | SJZ44856.1 | SAMN02745152_00277 | SAMN02745152_00274 | Hypothetical protein. | Dihydrofolate synthase / folylpolyglutamate synthase. | 0.471 |
SJZ44925.1 | SJZ44894.1 | SAMN02745152_00277 | SAMN02745152_00275 | Hypothetical protein. | tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.742 |
SJZ44925.1 | SJZ44954.1 | SAMN02745152_00277 | SAMN02745152_00278 | Hypothetical protein. | Phosphate starvation-inducible protein PhoH. | 0.683 |
SJZ44925.1 | SJZ44974.1 | SAMN02745152_00277 | SAMN02745152_00279 | Hypothetical protein. | Hypothetical protein. | 0.676 |
SJZ44925.1 | SJZ45057.1 | SAMN02745152_00277 | SAMN02745152_00281 | Hypothetical protein. | CBS domain-containing protein. | 0.555 |
SJZ44925.1 | SJZ45088.1 | SAMN02745152_00277 | SAMN02745152_00282 | Hypothetical protein. | Flp pilus assembly protein TadD, contains TPR repeats. | 0.785 |
SJZ44925.1 | uvrA | SAMN02745152_00277 | SAMN02745152_00276 | Hypothetical protein. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.816 |
SJZ44925.1 | ybeY | SAMN02745152_00277 | SAMN02745152_00280 | Hypothetical protein. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.676 |
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