STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ45999.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
SJZ45938.1
Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
     
 0.826
SJZ45961.1
Electron transport complex protein RnfC.
     
 0.806
SJZ45896.1
Hypothetical protein.
       0.773
SJZ45901.1
Hypothetical protein.
       0.773
SJZ45921.1
Hypothetical protein.
       0.773
SJZ45978.1
Hypothetical protein.
       0.773
SJZ46023.1
Hypothetical protein.
       0.606
SJZ45871.1
Protein of unknown function.
     
 0.575
SJZ46006.1
23S rRNA pseudouridine955/2504/2580 synthase; Belongs to the pseudouridine synthase RluA family.
       0.543
SJZ94469.1
Dolichol kinase.
  
     0.476
Your Current Organism:
Treponema berlinense
NCBI taxonomy Id: 225004
Other names: ATCC BAA-909, CIP 108244, JCM 12341, T. berlinense, Treponema berlinense Nordhoff et al. 2005, Treponema sp. 7CPL208, strain 7CPL208
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.