STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ56303.13-oxoacyl-[acyl-carrier protein] reductase. (230 aa)    
Predicted Functional Partners:
SJZ70161.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.955
SJZ70227.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.949
SKA06140.1
Glutamate synthase (ferredoxin).
     
 0.926
SJZ99394.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.918
SJZ70141.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
 0.907
SJZ91442.1
3-hydroxybutyrate dehydrogenase.
 
 
 0.860
SJZ43698.1
Hypothetical protein.
   
 0.831
SJZ53704.1
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.827
SJZ56327.1
Hypothetical protein.
 
     0.820
SJZ99703.1
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family.
   
 
 0.813
Your Current Organism:
Treponema berlinense
NCBI taxonomy Id: 225004
Other names: ATCC BAA-909, CIP 108244, JCM 12341, T. berlinense, Treponema berlinense Nordhoff et al. 2005, Treponema sp. 7CPL208, strain 7CPL208
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