node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ61579.1 | rplQ | SAMN02745152_00744 | SAMN02745152_01593 | Smr domain-containing protein. | Large subunit ribosomal protein L17. | 0.766 |
SJZ61579.1 | rplW | SAMN02745152_00744 | SAMN02745152_01571 | Smr domain-containing protein. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.737 |
SJZ61579.1 | rplY | SAMN02745152_00744 | SAMN02745152_01733 | Smr domain-containing protein. | Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.768 |
SJZ61579.1 | rpmB | SAMN02745152_00744 | SAMN02745152_00939 | Smr domain-containing protein. | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.739 |
SJZ61579.1 | rpmC | SAMN02745152_00744 | SAMN02745152_01577 | Smr domain-containing protein. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.761 |
SJZ61579.1 | rpsG | SAMN02745152_00744 | SAMN02745152_01566 | Smr domain-containing protein. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.738 |
SJZ61579.1 | rpsJ | SAMN02745152_00744 | SAMN02745152_01568 | Smr domain-containing protein. | Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.739 |
SJZ61579.1 | rpsL | SAMN02745152_00744 | SAMN02745152_01565 | Smr domain-containing protein. | Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.741 |
SJZ61579.1 | rpsU | SAMN02745152_00744 | SAMN02745152_01231 | Smr domain-containing protein. | Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.782 |
SJZ61579.1 | rpsZ | SAMN02745152_00744 | SAMN02745152_01582 | Smr domain-containing protein. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.739 |
rplQ | SJZ61579.1 | SAMN02745152_01593 | SAMN02745152_00744 | Large subunit ribosomal protein L17. | Smr domain-containing protein. | 0.766 |
rplQ | rplW | SAMN02745152_01593 | SAMN02745152_01571 | Large subunit ribosomal protein L17. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.992 |
rplQ | rplY | SAMN02745152_01593 | SAMN02745152_01733 | Large subunit ribosomal protein L17. | Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.984 |
rplQ | rpmB | SAMN02745152_01593 | SAMN02745152_00939 | Large subunit ribosomal protein L17. | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.985 |
rplQ | rpmC | SAMN02745152_01593 | SAMN02745152_01577 | Large subunit ribosomal protein L17. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.992 |
rplQ | rpsG | SAMN02745152_01593 | SAMN02745152_01566 | Large subunit ribosomal protein L17. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.989 |
rplQ | rpsJ | SAMN02745152_01593 | SAMN02745152_01568 | Large subunit ribosomal protein L17. | Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.990 |
rplQ | rpsL | SAMN02745152_01593 | SAMN02745152_01565 | Large subunit ribosomal protein L17. | Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.989 |
rplQ | rpsU | SAMN02745152_01593 | SAMN02745152_01231 | Large subunit ribosomal protein L17. | Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.932 |
rplQ | rpsZ | SAMN02745152_01593 | SAMN02745152_01582 | Large subunit ribosomal protein L17. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.990 |