STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ66668.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (366 aa)    
Predicted Functional Partners:
SJZ66892.1
WxcM-like, C-terminal.
 
 
 0.972
SJZ88465.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.962
SJZ66698.1
Acetyltransferase (GNAT) domain-containing protein.
 
     0.865
SJZ66738.1
Glycosyl transferase family 2.
 
  
 0.845
SJZ66396.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.834
SJZ66269.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.828
SJZ87302.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.810
SJZ67495.1
Predicted dehydrogenase.
  
 
 0.800
SJZ66621.1
Alpha-1,3-rhamnosyltransferase.
 
  
 0.799
SJZ66765.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
 
    0.798
Your Current Organism:
Treponema berlinense
NCBI taxonomy Id: 225004
Other names: ATCC BAA-909, CIP 108244, JCM 12341, T. berlinense, Treponema berlinense Nordhoff et al. 2005, Treponema sp. 7CPL208, strain 7CPL208
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