Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ53465.1 | SJZ68592.1 | SAMN02745152_00511 | SAMN02745152_00940 | Signal transduction histidine kinase. | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | 0.410 |
SJZ68592.1 | SJZ53465.1 | SAMN02745152_00940 | SAMN02745152_00511 | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | Signal transduction histidine kinase. | 0.410 |
SJZ68592.1 | SJZ68605.1 | SAMN02745152_00940 | SAMN02745152_00941 | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.544 |
SJZ68592.1 | SJZ79958.1 | SAMN02745152_00940 | SAMN02745152_01263 | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | 0.410 |
SJZ68592.1 | rpmB | SAMN02745152_00940 | SAMN02745152_00939 | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.456 |
SJZ68605.1 | SJZ68592.1 | SAMN02745152_00941 | SAMN02745152_00940 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | 0.544 |
SJZ79958.1 | SJZ68592.1 | SAMN02745152_01263 | SAMN02745152_00940 | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | 0.410 |
rpmB | SJZ68592.1 | SAMN02745152_00939 | SAMN02745152_00940 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase. | 0.456 |