STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ74842.1Putative zinc-or iron-chelating domain-containing protein. (214 aa)    
Predicted Functional Partners:
SKA04169.1
PPIC-type PPIASE domain-containing protein.
 
 
   0.735
SJZ38586.1
HD domain-containing protein.
  
     0.722
SKA02361.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
     0.689
SJZ51210.1
V/A-type H+-transporting ATPase subunit F.
  
     0.682
SJZ53973.1
Hexokinase.
  
     0.605
SJZ54092.1
Flagellar basal-body rod modification protein FlgD.
   
   0.584
SJZ92163.1
DNA polymerase III, delta subunit.
  
     0.583
SJZ67589.1
Adenylate cyclase, class 2.
  
     0.574
SJZ75490.1
Hypothetical protein.
  
     0.574
SKA02417.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
     0.560
Your Current Organism:
Treponema berlinense
NCBI taxonomy Id: 225004
Other names: ATCC BAA-909, CIP 108244, JCM 12341, T. berlinense, Treponema berlinense Nordhoff et al. 2005, Treponema sp. 7CPL208, strain 7CPL208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.