Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ39218.1 | SJZ78758.1 | SAMN02745152_00038 | SAMN02745152_01220 | Oxaloacetate decarboxylase, alpha subunit. | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | 0.701 |
SJZ39218.1 | SJZ99394.1 | SAMN02745152_00038 | SAMN02745152_01859 | Oxaloacetate decarboxylase, alpha subunit. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.961 |
SJZ78664.1 | SJZ78694.1 | SAMN02745152_01217 | SAMN02745152_01218 | Polar amino acid transport system permease protein. | Polar amino acid transport system ATP-binding protein. | 0.999 |
SJZ78664.1 | SJZ78725.1 | SAMN02745152_01217 | SAMN02745152_01219 | Polar amino acid transport system permease protein. | Cytidylate kinase. | 0.627 |
SJZ78664.1 | SJZ78758.1 | SAMN02745152_01217 | SAMN02745152_01220 | Polar amino acid transport system permease protein. | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | 0.594 |
SJZ78694.1 | SJZ78664.1 | SAMN02745152_01218 | SAMN02745152_01217 | Polar amino acid transport system ATP-binding protein. | Polar amino acid transport system permease protein. | 0.999 |
SJZ78694.1 | SJZ78725.1 | SAMN02745152_01218 | SAMN02745152_01219 | Polar amino acid transport system ATP-binding protein. | Cytidylate kinase. | 0.625 |
SJZ78694.1 | SJZ78758.1 | SAMN02745152_01218 | SAMN02745152_01220 | Polar amino acid transport system ATP-binding protein. | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | 0.594 |
SJZ78725.1 | SJZ78664.1 | SAMN02745152_01219 | SAMN02745152_01217 | Cytidylate kinase. | Polar amino acid transport system permease protein. | 0.627 |
SJZ78725.1 | SJZ78694.1 | SAMN02745152_01219 | SAMN02745152_01218 | Cytidylate kinase. | Polar amino acid transport system ATP-binding protein. | 0.625 |
SJZ78725.1 | SJZ78758.1 | SAMN02745152_01219 | SAMN02745152_01220 | Cytidylate kinase. | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | 0.732 |
SJZ78758.1 | SJZ39218.1 | SAMN02745152_01220 | SAMN02745152_00038 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | Oxaloacetate decarboxylase, alpha subunit. | 0.701 |
SJZ78758.1 | SJZ78664.1 | SAMN02745152_01220 | SAMN02745152_01217 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | Polar amino acid transport system permease protein. | 0.594 |
SJZ78758.1 | SJZ78694.1 | SAMN02745152_01220 | SAMN02745152_01218 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | Polar amino acid transport system ATP-binding protein. | 0.594 |
SJZ78758.1 | SJZ78725.1 | SAMN02745152_01220 | SAMN02745152_01219 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | Cytidylate kinase. | 0.732 |
SJZ78758.1 | SJZ99394.1 | SAMN02745152_01220 | SAMN02745152_01859 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.904 |
SJZ99394.1 | SJZ39218.1 | SAMN02745152_01859 | SAMN02745152_00038 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Oxaloacetate decarboxylase, alpha subunit. | 0.961 |
SJZ99394.1 | SJZ78758.1 | SAMN02745152_01859 | SAMN02745152_01220 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | 0.904 |