STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ91123.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (344 aa)    
Predicted Functional Partners:
SJZ91153.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.999
SJZ91108.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.998
SJZ91171.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.996
SJZ39335.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-).
 
 0.989
SJZ39348.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.989
SKA02507.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-).
 
 0.988
SJZ91084.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.980
SKA02485.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-).
 
 0.980
SKA02548.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
 0.951
SJZ39304.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.942
Your Current Organism:
Treponema berlinense
NCBI taxonomy Id: 225004
Other names: ATCC BAA-909, CIP 108244, JCM 12341, T. berlinense, Treponema berlinense Nordhoff et al. 2005, Treponema sp. 7CPL208, strain 7CPL208
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