STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA07437.1Glutamine synthetase. (397 aa)    
Predicted Functional Partners:
SKA06140.1
Glutamate synthase (ferredoxin).
  
 
 0.984
SKA07420.1
Response regulator receiver and ANTAR domain protein.
 
  
 0.940
SJZ43418.1
Aldo/keto reductase family protein.
  
 0.890
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.874
SJZ62376.1
Carbamoyl-phosphate synthase large subunit.
  
 
 0.872
SJZ62561.1
Ammonium transporter, Amt family; Belongs to the P(II) protein family.
 
  
 0.867
SJZ53704.1
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.853
SJZ82535.1
Glutamate synthase (NADPH/NADH) small chain.
  
 
 0.850
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
  
 
 0.847
SJZ97800.1
Phosphoribosylformylglycinamidine synthase.
  
 
 0.846
Your Current Organism:
Treponema berlinense
NCBI taxonomy Id: 225004
Other names: ATCC BAA-909, CIP 108244, JCM 12341, T. berlinense, Treponema berlinense Nordhoff et al. 2005, Treponema sp. 7CPL208, strain 7CPL208
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