STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3YWX5_LOTGIANK_REP_REGION domain-containing protein. (82 aa)    
Predicted Functional Partners:
V4AIJ0_LOTGI
VWFA domain-containing protein.
   
 0.576
V4A0C4_LOTGI
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.571
V4A5G1_LOTGI
RPN13_C domain-containing protein.
    
 0.563
V3ZJQ0_LOTGI
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.559
V4AE02_LOTGI
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.559
V4AES7_LOTGI
26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.
    
 0.559
V3ZRP7_LOTGI
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.558
V4AYR7_LOTGI
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.558
V4C3C2_LOTGI
PCI domain-containing protein.
    
 0.558
V3ZTQ5_LOTGI
UBX domain-containing protein.
    
  0.551
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.