STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3YXH3_LOTGIUncharacterized protein. (298 aa)    
Predicted Functional Partners:
V3ZF82_LOTGI
Uncharacterized protein.
  
  
 
0.908
V4A8C1_LOTGI
TPR_REGION domain-containing protein.
    
 0.660
V4BEM3_LOTGI
RING-type domain-containing protein.
     
 0.644
V3ZM68_LOTGI
SH3 domain-containing protein.
   
 
 0.639
V4B9Q0_LOTGI
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.577
V4AIR6_LOTGI
ACB domain-containing protein.
  
 
 0.558
V4A956_LOTGI
Uncharacterized protein.
    
 0.547
V4AIJ3_LOTGI
Uncharacterized protein.
    
 0.547
V4B5W7_LOTGI
Uncharacterized protein.
    
 0.547
V3ZZJ9_LOTGI
Uncharacterized protein.
      
 0.524
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.