STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V3YZV4_LOTGITPR_REGION domain-containing protein. (673 aa)    
Predicted Functional Partners:
V4BLS6_LOTGI
Uncharacterized protein.
    
 0.854
V4B656_LOTGI
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.603
V4AA40_LOTGI
Uncharacterized protein.
   
  
 0.588
V4A2F2_LOTGI
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 
 0.554
V4BSP2_LOTGI
Uncharacterized protein; Belongs to the Stoned B family.
      
 0.547
V4B2U3_LOTGI
Uncharacterized protein.
    
 0.528
V4AZN5_LOTGI
Uncharacterized protein.
    
 0.523
V3ZMW2_LOTGI
TPR_REGION domain-containing protein.
    
 0.520
V4BYG1_LOTGI
TPR_REGION domain-containing protein.
    
 0.517
V4AEN9_LOTGI
APC1_C domain-containing protein.
    
 0.512
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.