V3Z3R3_LOTGI protein (Lottia gigantea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

V3Z3R3_LOTGI

G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (370 aa)

Predicted Functional Partners:

V4AHL3_LOTGI

0.496

V4AQ99_LOTGI

0.456

V4A2J7_LOTGI

0.455

inx-11

0.446

V4A8H2_LOTGI

0.441

inx-5

0.438

V3ZZ35_LOTGI

0.433

V4A483_LOTGI

0.432

V4ABU9_LOTGI

0.432

inx-6

0.430

Your Current Organism:

Lottia gigantea

NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V3Z3R3_LOTGI	V3ZZ35_LOTGI	V3Z3R3	V3ZZ35	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Ig-like domain-containing protein.	0.433
V3Z3R3_LOTGI	V4A2J7_LOTGI	V3Z3R3	V4A2J7	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.455
V3Z3R3_LOTGI	V4A483_LOTGI	V3Z3R3	V4A483	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.432
V3Z3R3_LOTGI	V4A8H2_LOTGI	V3Z3R3	V4A8H2	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.441
V3Z3R3_LOTGI	V4ABU9_LOTGI	V3Z3R3	V4ABU9	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.432
V3Z3R3_LOTGI	V4AHL3_LOTGI	V3Z3R3	V4AHL3	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	SH3 domain-containing protein.	0.496
V3Z3R3_LOTGI	V4AQ99_LOTGI	V3Z3R3	V4AQ99	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.456
V3Z3R3_LOTGI	inx-11	V3Z3R3	V4BES3	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.446
V3Z3R3_LOTGI	inx-5	V3Z3R3	V3ZUL3	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.438
V3Z3R3_LOTGI	inx-6	V3Z3R3	V3ZZ22	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.430
V3ZZ35_LOTGI	V3Z3R3_LOTGI	V3ZZ35	V3Z3R3	Ig-like domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.433
V3ZZ35_LOTGI	V4AHL3_LOTGI	V3ZZ35	V4AHL3	Ig-like domain-containing protein.	SH3 domain-containing protein.	0.483
V4A2J7_LOTGI	V3Z3R3_LOTGI	V4A2J7	V3Z3R3	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.455
V4A483_LOTGI	V3Z3R3_LOTGI	V4A483	V3Z3R3	G_PROTEIN_RECEP_F1_2 domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.432
V4A483_LOTGI	V4AHL3_LOTGI	V4A483	V4AHL3	G_PROTEIN_RECEP_F1_2 domain-containing protein.	SH3 domain-containing protein.	0.432
V4A8H2_LOTGI	V3Z3R3_LOTGI	V4A8H2	V3Z3R3	G_PROTEIN_RECEP_F1_2 domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.441
V4A8H2_LOTGI	V4ABU9_LOTGI	V4A8H2	V4ABU9	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.444
V4ABU9_LOTGI	V3Z3R3_LOTGI	V4ABU9	V3Z3R3	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.432
V4ABU9_LOTGI	V4A8H2_LOTGI	V4ABU9	V4A8H2	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.444
V4AHL3_LOTGI	V3Z3R3_LOTGI	V4AHL3	V3Z3R3	SH3 domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.496